Hail GWAS analysis notebook
Hail - GWAS Tutorial
Load required libraries and initialize
Get SparkUI url for Binder
Download public 1000 Genomes data
Importing data from VCF
Explore data
Adding column fields
Using query functions and the Hail Expression Language
Quality Control
Plotting the QC metrics
GWAS Analysis
Confounded
Rare variant analysis
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Hail GWAS analysis notebook
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